Dirección de estudios de posgrado

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Gracida Olivera, A. L., Cruz Flores, R., Cáceres Martínez, J. A., & Vasquez Yeomans, R. (2026). Shell-burrowing worms (Annelida: Polychaeta: Spionida) Boccardiella quintinenis sp. Nov. (Gracida-Olivera, Cruz-Flores, C¿aceres-Martínez, 2023) and Polydora websteri (Hartman, 1943) infesting cultured Magallana gigas from Bahía San Quintin, Baja California, Mexico. Journal of Invertebrate Pathology, 217(1), 12. https://doi.org/10.1016/j.jip.2026.108607. (ID: 31645)

Cruz Flores, R., Dhar, A. P., Andrade, T. P. D., Dhar, A. K., & Cabanillas Bernal, O. (2026, Febrero). UNCOVERING THE HIDDEN PREVALENCE OF Penaeus vannamei SOLINVIVIRUS IN PUBLIC TRANSCRIPTOMIC RESOURCES. Aquaculture 2026. Las Vegas, NV (ID: 31650)

Fierro Reséndiz, S., Cruz Flores, R., & Sánchez Saavedra, M. P. (2026). Photosynthetic and morphological responses of Chaetoceros sp. to nutrient limitation over culture age. Journal of Applied Phycology. https://doi.org/10.1007/s10811-025-03765-w. (ID: 31228)

Cáceres Martínez, J. A., Kawamoto Camacho, N. A., Vasquez Yeomans, R., & Cruz Flores, R. (2026). The protozoan parasite Perkinsus marinus in bivalve mollusks from Mexico: A review. Reviews in Aquaculture, (1), 15. https://doi.org/10.1111/raq.70135. (ID: 31646)

Cruz Flores, R., Mai, H. N., & Dhar, A. K. (2026). Advances in Shrimp Infectious Disease Research: The Role of Next-Generation Sequencing. In Basanta Kumar Das Vikash Kumar Suvra Roy (Eds.), Bioinformatics Tools for Predictive Ecology and Fisheries (pp. 469-489). Springer. (ID: 31501)

Cruz Flores, R., Cáceres Martínez, J. A., & Dhar, A. K. (2026). Laser Microdissection and Near Single-Cell Whole Genome Amplification. In Yafeng Ma (Eds.), Whole Genome Amplification (pp. 165-173). Springer. (ID: 31502)

Camacho Méndez, K., Vásquez Ponce, F., Ramírez, F., Valenzuela, C., Alcalde Rico, M., López Carvallo, J. A., Gallardo Matus, J., Cruz Flores, R., Zarza, C., Mercado, L., & Olivares Pacheco, J. (2025). Gut dysbiosis after successive administration of florfenicol-medicated feed alters intestinal inflammatory response and growth patterns in healthy Atlantic salmon (Salmo salar). Animal Microbiome, 7(122), 1-13. doi: 10.1186/s42523-025-00490-0. (ID: 30980)

Sánchez González, M. A., Cruz Flores, R., Ventura López, C., Lafarga de la Cruz, F., Cáceres Martínez, J. A., & Re Araujo, A. D. (2025, Octubre). Evaluación de dos dietas comerciales en el desarrollo gonadal y la carga simbiótica en el abulón Haliotis rufescens. Congreso Acuicultura en Latinoamérica (LAQUA), World Aquaculture Society (WAS). Puerto Varas, Chile (ID: 31337)

Cruz Flores, R. (2025, Septiembre). Técnicas modernas de diagnóstico y su aplicación en la acuacultura. XII SIMPOSIO INTERNACIONAL DE SANIDAD E INOCUIDAD ACUÍCOLA. Ensenada, México (ID: 30889)

Campa Córdova, Á. I., Mazón Suástegui, J. M., López Carvallo, J. A., García Bernal, M., Cruz Flores, R., Dhar, A. K., Peña Navarro, N., Sánchez Ortiz, A. C., & López Torres, M. A. (2025). Practices for shrimp disease detection, control, management, and genetics improvement. In LUIS RAFAEL MARTÍNEZ-CÓRDOVA MARCEL MARTÍNEZ-PORCHAS (Eds.), Strategies for Sustainable Shrimp Aquaculture (1 ed., pp. 71-123). Academic Press. (ID: 30808)

Rodríguez Jaramillo, C., Cruz Flores, R., Mazón Suástegui, J. M., Arcos Ortega, G. F., Brokordt, K., Lira, G., Lohrmann, K., Fajardo Yamamoto, A., Álvarez Vergara, G., & López Carvallo, J. A. (2025). Digital Histology in Aquaculture: From Qualitative to a Quantitative Tool. Reviews in Fisheries Science. doi: 10.1080/23308249.2025.2532699. (ID: 30744)

García Armenta, J., Vargas Peralta, C. E., Cruz Flores, R., Cabanillas Bernal, O., López Carvallo, J. A., & Cáceres Martínez, J. A. (2025). Identification of a novel antimicrobial resistance associated plasmid in Pseudomonas sp. from disease tilapia (Oreochromis niloticus). Gene Reports. doi: 10.1016/j.genrep.2025.102220. (ID: 30658)

García Armenta, J., Cruz Flores, R., Cabanillas Bernal, O., & Cáceres Martínez, J. A. (2025, Marzo). IDENTIFICATION OF A NOVEL ANTIMICROBIAL RESISTANCE-ASSOCIATED MEGAPLASMID IN PSEUDOMONAS SP. FROM DISEASED TILAPIA (Oreochromis niloticus). Aquaculture 2025. New Orleans, LA (ID: 30888)

López Galicia, M. M. C., Cruz Flores, R., Mercier, L., Quiroz Guzman, E., & Cáceres Martínez, J. A. (2025, Marzo). DETECTION OF PATHOGENS IN THE CULTURE ENVIRONMENT OF PACIFIC WHITE SHRIMP (Penaeus vannamei) THROUGH NEXT-GENERATION SEQUENCING. Aquaculture 2025. New Orleans, LA (ID: 30887)

Fierro Reséndiz, S., Sánchez Saavedra, M. P., & Cruz Flores, R. (2025, Marzo). Physiological performance of the diatom Chaetoceros sp. at exponential and stationary growth phases. Aquaculture 2025. New Orleans, LA (ID: 30672)

Manzano Mora, M. M., Diaz Guzman, D. A., Tripp Valdez, M. A., Cruz Flores, R., Beas Luna, R., Galindo Sánchez, C. E., & Lafarga de la Cruz, F. (2025, Marzo). BIOLOGICAL PERFORMANCE OF RED ABALONE Haliotis rufescens ON AN EXPERIMENTAL MARINE BOTTOM CULTURE SYSTEM. Aquaculture 2025. New Orleans, LA (ID: 30643)

Vasquez Yeomans, R., Cruz Flores, R., & Cáceres Martínez, J. A. (2025). Laser Capture Microdissection of Vibrio splendidus from Haliotis rufescens during a post-spawning mortality episode, an alternative method for the study of diseases in aquaculture. AquaTechnica, 7(1), 28-38. doi: 10.5281/zenodo.14742344. (ID: 30915)

Cruz Flores, R. (2025, Febrero). Desafíos en el diagnóstico de enfermedades infecciosas en organismos acuáticos: impactos científicos y comerciales. Acuacam 2025: expo acuacultura. Ciudad Obregón, México (ID: 30591)

Trejo Ramos, D. A., Rodriguez Arana, C. O., Cruz Flores, R., & Hernández Rodríguez, M. (2025). Effect of Oregano Essential Oil on Growth and Composition of Gut Prokaryote Microbiota on Striped Bass (Morone saxatilis). Microorganisms. doi: 10.3390/microorganisms13020264. (ID: 30593)

Cáceres Martínez, J. A., Cruz Flores, R., Naranjo, E., del Río Portilla, M. Á., & Vasquez Yeomans, R. (2024). Discovery of the Asian Clam Corbicula sp. form A in Ensenada, Baja California Through Conventional Taxonomy and Innovative Shell DNA Whole Genome Amplification. Limnologica. doi: 10.1016/j.limno.2024.126222. (ID: 30311)

López Galicia, M. M. C., Cruz Flores, R., Mercier, L., Quiroz Guzman, E., & Cáceres Martínez, J. A. (2024, Diciembre). Detection of pathogens in the culture environment of Pacific white shrimp (Penaeus vannamei) through next-generation sequencing. Southern California Society of Parasitology. Ensenada, México (ID: 30308)

Vasquez Yeomans, R., Cáceres Martínez, J. A., Cruz Flores, R., & Guerrero Rentería, Y. (2024, Diciembre). Trichodine-like ciliates and other symbionts associated with an event of mass mortality of diploid and triploid pacific oyster Magallana gigas cultured in Baja California Sur, Mexico. Simposio de la Southern California Society of Parasitology (SCSP). Ensenada, México (ID: 30304)

Rodríguez Lizarraga, E., Vasquez Yeomans, R., Cáceres Martínez, J. A., Cruz Flores, R., & Guerrero Rentería, Y. (2024, Diciembre). Emerging of the shell disease in the pacific oyster Magallana gigas cultured in Baja California Sur, Mexico. Southern California Society of Parasitology. Ensenada, México (ID: 30305)

Kawamoto Camacho, N. A., Cáceres Martínez, J. A., Vasquez Yeomans, R., Cruz Flores, R., & Guerrero Rentería, Y. (2024, Diciembre). Presence of Perkinsus marinus in the environment and several mollusks species from Nayarit and its implications for Baja California Peninsula, Mexico. Southern California Society of Parasitology. Ensenada, México (ID: 30306)

García Armenta, J., Cruz Flores, R., Cabanillas Bernal, O., & Cáceres Martínez, J. A. (2024, Diciembre). Identification of a novel antimicrobial resistance-associated megaplasmid in Pseudomonas sp. from diseased tilapia (Oreochromis niloticus). Southern California Society of Parasitology. Ensenada, México (ID: 30307)

Pérez Bustamente , I. S., Cruz Flores, R., Ramírez Álvarez , N., Cáceres Martínez, J. A., Hernández Rodríguez, M., Sánchez Serrano, S., & López Carvallo, J. A. (2024, Octubre). Evaluación histológica de juveniles de Totoaba macdonaldi expuestos a microplásticos de polietileno. 3er Simposio Mexicano de Contaminación por Plásticos. Yucatán, México (ID: 30030)

Pérez Bustamante, I. S., Cruz Flores, R., López Carvallo, J. A., & Sánchez Serrano, S. (2024). Effect of the 16S rRNA Gene Hypervariable Region on the Microbiome Taxonomic Profile and Diversity in the Endangered Fish Totoaba macdonaldi. Microorganisms. doi: 10.3390/microorganisms12112119. (ID: 29895)

Cruz Flores, R., & Dhar, A. K. (2024). Tracking the emergence of a novel genotype of Decapod hepanhamaparvovirus in shrimp using laser microdissection and next generation sequencing. PLoS ONE. doi: 10.1371/journal.pone.0311592. (ID: 29864)

Trejo Ramos, D. A., Rodriguez Arana, C. O., Cruz Flores, R., & Hernández Rodríguez, M. (2024, Septiembre). Effect of oregano essential oil Origanum vulgare subp. hirticum on growth performance and gut microbiota of striped bass Morone saxatilis. LACQUA24. Medellín, Colombia (ID: 30029)

Cáceres Martínez, J. A., Pérez Bustamante, I. S., Gracida Olivera, A. L., Cruz Flores, R., Vasquez Yeomans, R., & Juárez Camacho, P. (2024, Agosto). The Pacific oyster Magallana gigas cultured in Bahia San Quintin, Baja California, affected by a new polydorid species Bocardiella vicentina. American Malacological Society & Western Society of Malacology. Pasadena, CA (ID: 30298)

Cáceres Martínez, J. A., Guarneros Martínez, T. C., del Río Portilla, M. Á., Cruz Flores, R., Castro Longoria, E., & Pérez Bustamante, I. S. (2024, Agosto). The pleasure oyster Crassostrea corteziensis related with an intracellular prokaryote belonging to the order Rickettsiales. The Annual Meeting of the American Malacological Society & Wester Society of Malacologist. Pasadena, CA (ID: 30300)

Cáceres Martínez, J. A., Cruz Flores, R., del Río Portilla, M. Á., Pérez Bustamante, I. S., Vasquez Yeomans, R., & Naranjo, E. (2024, Agosto). First record of the Asian Clam Corbicula fluminea in Ensenada Baja California. The Annual Meeting of the American Malacological Society & Wester Society of Malacologist. Pasadena, CA (ID: 30299)

Cruz Flores, R., Siewiora, H. M., Kanrar, S., Le Groumellec, M., & Dhar, A. K. (2024). Identification and characterization of a novel strain of Decapod hepanhamaparvovirus in black tiger shrimp (Penaeus monodon) from Madagascar that does not cause histological lesions. Aquaculture. doi: 10.1016/j.aquaculture.2024.740904. (ID: 29680)

Guarneros Martínez, T. C., Cáceres Martínez, J. A., Cruz Flores, R., López Carvallo, J. A., del Río Portilla, M. Á., & Guerrero Rentería, Y. (2024). Prevalence and intensity of a Rickettsiales-like organism in cultured pleasure oyster, Crassostrea corteziensis, from Nayarit, Mexico. Journal of Invertebrate Pathology, 204, 108093. doi: 10.1016/j.jip.2024.108093. (ID: 29664)

Pantoja, C., Mai, H. N., Cruz Flores, R., Lynn, S., Koliopolus, M., & Dhar, A. K. (2024, Febrero). HEPATOPANCREATIC MICROSPORIDIOSIS IN THE AMERICAS. Aquaculture America 2024. San Antonio, TX (ID: 29910)

Cruz Flores, R., & Dhar, A. K. (2024, Febrero). TRACKING DOWN AND CHARACTERIZING DIVERGENT STRAINS OF VIRAL SHRIMP PATHOGENS THROUGH MOLECULAR HISTOLOGY: THE CASE OF A NEW GENOTYPE OF Decapod hepanhamaparvovirus. Aquaculture America 2024. San Antonio, TX (ID: 29908)

Cruz Flores, R., Guarneros Martínez, T. C., Cáceres Martínez, J. A., López Carvallo, J. A., del Río Portilla, M. Á., & Guerrero Rentería, Y. (2024, Febrero). RICKETTSIALES-LIKE ORGANISM IN CULTURED PLEASURE OYSTER Crassostrea corteziensis FROM MÉXICO, PREVALENCE AND INTENSITY. Aquaculture America 2024. San Antonio, TX (ID: 29909)

Dhar, A. K., Cruz Flores, R., Mai, H. N., & Warg, J. (2023). Comparison of Polymerase Chain Reaction (PCR) assay performance in detecting Decapod penstylhamaparvovirus 1 in penaeid shrimp. Journal of Virological Methods, 323(114840), 1-10. doi: 10.1016/j.jviromet.2023.114840. (ID: 29075)

Dhar, A. K., Cruz Flores, R., Mai, H. N., Aranguren Caro, L. F., Intriago, P., & Romero, X. (2023). Detection of a novel microsporidium with intranuclear localization in farmed Penaeus vannamei from Latin America. Journal of Invertebrate Pathology, 200. doi: 10.1016/j.jip.2023.107968. (ID: 28843)

Peña Navarro, N., López Carvallo, J. A., Chacón Perez, B., & Cruz Flores, R. (2023). Application of PCR-based diagnostic tools that target Enterocytozoon hepatopenaei for the molecular detection of a Vittaforma-like microsporidium that infects Penaeus vannamei from Costa Rica. Journal of Invertebrate Pathology, (107958). doi: 10.1016/j.jip.2023.107958. (ID: 28839)

Reyes Martínez, M. R., Cruz Flores, R., & Ladah, L. B. (2023, Junio). Detección y caracterización molecular de agentes patógenos que afectan al alga parda Macrocystis pyrifera con un enfoque dirigido a mejorar las prácticas de producción. Festival Regional de Pesca y Acuacultura 2023. Mexicali, México (ID: 29431)

Major, S. R., Harke, M. J., Cruz Flores, R., Dhar, A. K., Bodnar, A. G., & Wanamaker , S. A. (2023). Rapid Detection of DNA and RNA Shrimp Viruses Using CRISPR-Based Diagnostics. Applied and Environmental Microbiology. doi: 10.1128/aem.02151-22. (ID: 28791)

Aranguren Caro, L. F., Gomez Sánchez, M. M., Piedrahita, Y., Mai, H. N., Cruz Flores, R., Alenton R, R. R., & Dhar, A. K. (2022). Current status of IHHNV infection in Peru's and Ecuador's shrimp industries. Global Aquaculture Advocate. (ID: 28236)

Trejo Ramos, D. A., Cáceres Martínez, J. A., Sanchez Serrano, S., Vasquez Yeomans, R., & Cruz Flores, R. (2022). Histopathology of cultured juvenile Totoaba macdonaldi associated with bacterial isolates molecularly identified as Vibrio spp. during a temperature increase event. AquaTechnica, 4(3), 150-160. doi: 10.33936/at.v4i3.5258. (ID: 28439)

Andrade Passos de, T., Cruz Flores, R., Dhar, A. K., & Mai, H. N. (2022). Pandemia do Covid-19 x Doenças de Camarões Emergentes na Indústria da América Latina e do Brasil. Revista temporal DEP. (ID: 27573)

Cruz Flores, R., Andrade Passos de, T., Mai, H. N., Alenton, R. R., & Dhar, A. K. (2022). Identification of a Novel Solinvivirus with Nuclear Localization Associated with Mass Mortalities in Cultured Whiteleg Shrimp (Penaeus vannamei). Viruses, 14. doi: 10.3390/v14102220. (ID: 27977)

López Carvallo, J. A., Cruz Flores, R., & Dhar, A. K. (2022). The emerging pathogen Enterocytozoon hepatopenaei drives a degenerative cyclic pattern in the hepatopancreas microbiome of the shrimp (Penaeus vannamei). Scientific Reports, 12. doi: 10.1038/s41598-022-19127-2. (ID: 27976)

Aranguren Caro, L. F., Gomez Sanchez, M., Piedrahita, Y., Mai, H. N., Cruz Flores, R., Alenton R, R. R., & Dhar, A. K. (2022). Current status of infection with infectious hypodermal and hematopoietic necrosis virus (IHHNV) in the Peruvian and Ecuadorian shrimp industry. PLoS ONE. doi: 10.1371/journal.pone.0272456. (ID: 27856)

Mazón Suástegui, J. M., Arcos Ortega, G. F., Contreras Mendoza, C. N., Medina Sánchez, J. R., Chávez Villalba, J., Lodeiros, C., Cruz Flores, R., & López Carvallo, J. A. (2022). Enhanced growth of the pleasure oyster Crassostrea corteziensis cultured under integrated multi-trophic aquaculture (IMTA) concept, using farm effluents of shrimp Penaeus vannamei. Aquaculture Research, (00), 1-13. doi: 10.1111/are.16005. (ID: 27830)

Guarneros Martínez, T. C., Cruz Flores, R., Cáceres Martínez, J. A., & Guerrero Rentería, Y. (2022, Mayo). GENETIC CHARACTERIZATION AND EPIZOOTIOLOGY OF RICKETTSIALES-LIKE ORGANISM ASSOCIATED WITH TISSUE INCLUSIONS OF THE OYSTER Crassostrea corteziensis IN THE STATE OF NAYARIT. WORLD AQUACULTURE 2021. Mérida, México (ID: 28240)

Gracida Olivera, A. L., Cruz Flores, R., & Cáceres Martínez, J. A. (2022, Mayo). CARACTERIZACIÓN MORFOLÓGICA Y GENÉTICA DE LAS ESPECIES POLIDÓRIDAS QUE AFECTAN A Magallana gigasCULTIVADAS EN LA BAHÍA DE SAN QUINTÍN. World Aquaculture 2021. Mérida, México (ID: 28241)

Cáceres Martínez, J. A., Cruz Flores, R., Naranjo, E., & Vasquez Yeomans, R. (2022, Mayo). FIRST RECORD OF THE INVASIVE CLAM Corbicula fluminea IN ENSENADA, BAJA CALIFORNIA, COULD BE A CANDIDATE FOR AQUACULTURE?. World Aquaculture 2021. Mérida, México (ID: 28239)

Cruz Flores, R., Hernández Rodríguez, M., Guirado Flores, J. S. O., & Dhar, A. K. (2022, Mayo). USING FORMALIN-FIXED PARAFFIN-EMBEDDED TISSUES AS A SOURCE OF NUCLEIC ACIDS FOR MICROBIOME ANALYSIS IN RAINBOW TROUT Oncorhynchus mykiss. World Aquaculture 2021. Mérida, México (ID: 28111)

Cruz Flores, R., López Carvallo, J. A., Cáceres Martínez, J. A., & Dhar, A. K. (2022). Microbiome analysis from formalin-fixed paraffin-embedded tissues: Current challenges and future perspectives. Journal of Microbiological Methods, 196, 106476. doi: 10.1016/j.mimet.2022.106476. (ID: 27775)

Rosales Leija, M., Lazo Corvera, J. P., Cruz Flores, R., Guerrero Rentería, Y., Campos Espinoza, A., Pires, S. T., & Gatlin, D. M. (2022, Marzo). EFFECTS OF DIETARY INCLUSION OF COTTON AND POLYESTER MICROFIBERS ON PRODUCTION AND HEALTH OF Litopenaeus vannamei. XVI INTERNATIONAL SYMPOSIUM ON AQUACULTURE NUTRITION. Monterrey, México (ID: 27769)

Andrade, T. P. D., Cruz Flores, R., Mai, H. N., & Dhar, A. K. (2022). Novel infectious myonecrosis virus (IMNV) variant is associated with recent disease outbreaks in Penaeus vannamei shrimp in Brazil. Aquaculture, 554(738159), 1-5. doi: 10.1016/j.aquaculture.2022.738159. (ID: 27742)

Aranguren Caro, L. F., Mai, H. N., Cruz Flores, R., Marcos, F. L., Alenton R, R. R., & Dhar, A. K. (2022). Estudio: Síndrome de Heces Blancas en camarones puede ser causado por más de un patógeno. Global Aquaculture Advocate. (ID: 28235)

Dhar, A. K., Cruz Flores, R., & Bateman, K. S. (2022). Viral diseases of crustaceans. In Andrew F. Rowley (Eds.), Invertebrate Pathology (pp. 368-398). Oxford University Press. (ID: 30890)

Dhar, A. K., Cruz Flores, R., Warg, J., Killian, M. L., Andrew, O., Ramos, J., Garfias, M., & Lyons, G. (2022). Genetic Relatedness of Infectious Hypodermal and Hematopoietic Necrosis Virus Isolates, United States, 2019. Emerging Infectious Diseases, 28(2), 373-381. (ID: 27401)

salvi, D., Bertsch, H., Cáceres Martínez, J. A., Cruz Flores, R., del Río Portilla, M. Á., Eernisse D., J., Healy, J. M., Lafarga de la Cruz, F., Londoño Cruz, E., McDougall, C., Oliver, G. P., Oliverio, M., Paniagua Chávez, C. G., Willan, R. C., Zacherl, D. C., & Mariottini, P. (2022). Taxonomic discussion on scientific names for Pacific oysters requires evidence-based arguments and pluralism. Aquaculture, 546. doi: 10.1016/j.aquaculture.2021.737298.. (ID: 27825)

Aranguren Caro, L. F., Mai, H. N., Cruz Flores, R., Marcos, F. L., Alenton, R. R., & Dhar, A. K. (2021). Experimental reproduction of White Feces Syndrome in whiteleg shrimp, Penaeus vannamei. PLoS ONE. doi: 10.1371/journal.pone.0261289. (ID: 27215)

Cruz Flores, R., Hernández Rodríguez, M., Guirado Flores, J. S. O., & Dhar, A. K. (2021). Formalin-fixed paraffin-embedded tissues for microbiome analysis in rainbow trout (Oncorhynchus mykiss) Roberto. Journal of Microbiological Methods, 192(106389), 5. doi: 10.1016/j.mimet.2021.106389. (ID: 27153)

Lafarga de la Cruz, F., Hyde, J. R., Galindo Sánchez, C. E., Valenzuela Quiñoñez, F., del Río Portilla, M. Á., Cruz Flores, R., Cáceres Martínez, J. A., Abadía Cardoso, A., Purcell, C., Tripp Valdez, M. A., Elizondo Reyna, E., Araneda Tolosa, C., Larrain, M. A., Vargas Peralta, C. E., Mejía Ruíz, P., Mares Mayagoita, J. A., & Delgadillo Anguiano, C. (2021, Octubre). La genética como herramienta para la pesquería, cultivo y repoblamiento del recurso abulón en México. ALAG 2021, CHILE. SIMPOSIO HERRAMIENTAS GENÓMICAS Y BIOTECNOLÓGICAS PARA LA CONSERVACIÓN DE RECURSOS ACUÁTICOS. Santiago, Chile (ID: 27282)

Cáceres Martínez, J. A., Cruz Flores, R., Vasquez Yeomans, R., & Tinoco Orta, G. D. (2021, Junio). A New species of Rickettsiales-like prokaryote coexists with Candidatus Xenohaliotis californiensis and the bacteriophage pCXc in red abalone Haliotis rufescens. The 54th Annual Meeting of the Western Society of Malacologists - Symposium Current status of mollusk diseases in the West Coast of North America. Ensenada, México (ID: 27746)

Cáceres Martínez, J. A., Guarneros Martínez, T. C., & Cruz Flores, R. (2021, Junio). Genetic characterization of the Rickettsiales-like organism associated with tissue inclusions in the oyster Crassostrea corteziensis. The 54th Annual Meeting of the Western Society of Malacologists - Symposium Current status of mollusk diseases in the West Coast of North America. Ensenada, México (ID: 27533)

Cáceres Martínez, J. A., Gracida Olivera, A. L., & Cruz Flores, R. (2021, Junio). Gene expression associated with poecilogony and identification of the polydoride affecting cultured Crassostrea gigas from San Quintín Bay. The 54th Annual Meeting of the Western Society of Malacologists - Symposium Current status of mollusk diseases in the West Coast of North America. Ensenada, México (ID: 27535)

Cruz Flores, R., Cáceres Martínez, J. A., Dhar, A. K., & Vasquez Yeomans, R. (2021, Junio). Baculo-like virus associated with macro-crystal inclusions in the gonadal tissue of red abalone Haliotis rufescens. The 54th Annual Meeting of the Western Society of Malacologists - Symposium Current status of mollusk diseases in the West Coast of North America. Ensenada, México (ID: 27019)

Mai, H. N., Aranguren Caro, L. F., Cruz Flores, R., Noble White, B., & Dhar, A. K. (2021). Differentially Expressed Genes in Hepatopancreas of Acute Hepatopancreatic Necrosis Disease Tolerant and Susceptible Shrimp (Penaeus vannamei). Frontiers in Immunology, 12, 1-10. doi: 10.3389/fimmu.2021.634152. (ID: 26962)

Cruz Flores, R., & Dhar, A. K. (2021). Expediting viral discovery in shrimp aquaculture by combining conventional histopathology and genomics. Revista temporal DEP, 54(1), 9. (ID: 27591)

Pérez Bustamante, I. S., Cáceres Martínez, J. A., Cruz Flores, R., & Vasquez Yeomans, R. (2021). First record of dark leathery surface of geoduck clams in Panopea globosa. Journal of Invertebrate Pathology, 180. doi: 10.1016/j.jip.2021.107543. (ID: 26731)

Cruz Flores, R., Mai, H. N., & Dhar, A. K. (2020). Complete genome reconstruction and genetic analysis of Taura syndrome virus of shrimp from archival Davidson's-fixed paraffin embedded tissue. Virology Journal, 553, 171-121. doi: 10.1016/j.virol.2020.11.009. (ID: 26843)

Cruz Flores, R. (2020, Noviembre). Desarrollo de nuevas herramientas de diagnóstico para organismos acuáticos. 3er Coloquio de Nutrigenómica y Biotecnología Acuícola 2020. Tepic, México (ID: 26861)

Cáceres Martínez, J. A., Cruz Flores, R., Vasquez Yeomans, R., & Tinoco Orta, G. D. (2020). Coexistence of the stippled Rickettsiales-like prokaryote with Candidatus Xenohaliotis californiensis and the bacteriophage pCXc in farmed red abalone Haliotis rufescens from Mexico. Aquaculture, 532. doi: 10.1016/j.aquaculture.2020.736026. (ID: 26178)

Aranguren Caro, L. F., Mai, H. N., Kanrar, S., Cruz Flores, R., & Dhar, A. K. (2020). A Mutant of Vibrio parahaemolyticus pirABVP (+) That Carries Binary Toxin Genes but Does Not Cause Acute Hepatopancreatic Necrosis Disease. Microorganisms, 8(10), 1-13. doi: 10.3390/microorganisms8101549. (ID: 26841)

Aranguren Caro, L. F., Mai, H. N., Pichardo, O., Cruz Flores, R., Hanggono, B., & Dhar, A. K. (2020). Evidences supporting Enterocytozoon hepatopenaei association with white feces syndrome in farmed Penaeus vannamei in Venezuela and Indonesia. Diseases of Aquatic Organisms, 141, 71-78. doi: 10.3354/dao03522. (ID: 26842)

Ochoa, L. M., Cruz Flores, R., & Dhar, A. K. (2020). Detection and Phylogenetic Analyses of Taura Syndrome Virus from Archived Davidson¿s-Fixed Paraffin-Embedded Shrimp Tissue. Viruses, 12(9), 1-16. doi: 10.3390/v12091030. (ID: 26840)

Cruz Flores, R., Mai, H. N., Kanrar, S., Aranguren Caro, L. F., & Dhar, A. K. (2020). Genome reconstruction of white spot syndrome virus (WSSV) from archival Davidson¿s-fixed paraffin embedded shrimp (Penaeus vannamei) tissue. Scientific Reports, 10(1), 1-10. doi: 10.1038/s41598-020-70435-x. (ID: 26839)

Mai, H. N., Cruz Flores, R., & Dhar, A. K. (2020). Development of an indirect Enzyme Linked Immunoassay (iELISA) using monoclonal antibodies against Photorhabdus insect related toxins, PirAVp and PirBVp released from Vibrio spp. Journal of Microbiological Methods, 176, 1-9. doi: 10.1016/j.mimet.2020.106002. (ID: 26838)

Cruz Flores, R., & Cáceres Martínez, J. A. (2020). Rickettsiales-like organisms in bivalves and marine gastropods: a review. Reviews in Aquaculture, 1-17. doi: 10.1111/raq.12419. (ID: 25967)

Cruz Flores, R., Sullivan J, T., Dhar, A. K., Collins J, J., & Bodnar G, A. (2020, Febrero). CRISPR-BASED DIAGNOSTICS FOR RAPID DETECTION OF WHITE SPOT SYNDROME VIRUS IN SHRIMP. Aquaculture America 2020. Honolulu, HI (ID: 26860)

Cruz Flores, R., Dhar, A. K., Ramos, J., Garfias, M., & Lyons, G. (2020, Febrero). ASSESSING GENETIC RELATEDNESS OF INFECTIOUS HYPODERMAL AND HAEMATOPOIETIC NECROSIS VIRUS (IHHNV) ISOLATES RECENTLY DETECTED IN THE US. Aquaculture America 2020. Honolulu, HI (ID: 26858)

Cruz Flores, R., Ochoa, L. M., & Dhar, A. K. (2020, Febrero). DETECTION AND GENOME RECONSTRUCTION OF TAURA SYNDROME VIRUS OF SHRIMP FROM DAVIDSON'S FIXED PARAFFIN EMBEDDED SHRIMP TISSUE. Aquaculture America 2020. Honolulu, HI (ID: 26859)

Mai, H. N., Cruz Flores, R., Aranguren Caro, L. F., Noble White, B., & Dhar, A. K. (2020). A comparative study of Enterocytozoon hepatopenaei (EHP) challenge methods in Penaeus vannamei. Journal of Invertebrate Pathology, 171(2020), 1-7. doi: 10.1016/j.jip.2020.107336. (ID: 26837)

Sullivan J, T., Dhar, A. K., Cruz Flores, R., & Bodnar G, A. (2019). Rapid, CRISPR-Based, field- Deployable Detection of White Spot Syndrome Virus in Shrimp. Scientific Reports, 9(1), 1-7. doi: 10.1038/s41598-019-56170-y. (ID: 26836)

Cruz Flores, R., Mai, H. N., Aranguren Caro, L. F., Kanrar, S., & Dhar, A. K. (2019, Noviembre). Complete Genome Reconstruction of White Spot Syndrome Virus from archival Davidson-fixed paraffin embedded shrimp tissue. LACQUA 2019. San José, Costa Rica (ID: 26857)

García Mendoza, M. E., Cáceres Martínez, J. A., Vasquez Yeomans, R., & Cruz Flores, R. (2019). Bacteriological water quality of recirculating aquatic systems for maintenance of yellowtail amberjack Seriola lalandi. Journal of the World Aquaculture Society, 1-20. doi: 10.1111/jwas.12620. (ID: 24921)

Cruz Flores, R., Mai, H. N., Noble, B. L., Schofiel, P. J., & Dhar, A. K. (2019). Detection of Enterocytozoon hepatopenaei using an invasive but non-lethal sampling method in shrimp (Penaeus vannamei). Journal of Microbiological Methods, 162, 38-41. doi: 10.1016/j.mimet.2019.05.008. (ID: 26834)

Dhar, A. K., Cruz Flores, R., Aranguren Caro, L. F., Siewiora, H. M., & Jory, D. (2019). Diversity of single-stranded DNA containing viruses in shrimp. VirusDisease, 30, 43-57. doi: 10.1007/s13337-019-00528-3. (ID: 26833)

Cruz Flores, R., Dhar, A. K., & Mai, H. N. (2019, Marzo). HEPATOPANCREAS TISSUE BIOPSY: AN INVASIVE BUT NON-LETHAL SAMPLING METHOD FOR THE DETECTION OF Enterocytozoon hepatopenaei IN SHRIMP. Aquaculture 2019. New Orleans, LA (ID: 26855)

Cruz Flores, R., Mai, H. N., Noble, B. L., Aranguren Caro, L. F., Dhar, A. K., & Lin, J. (2019, Marzo). Comparative Study of Enterocytozoon hepatopenaei (EHP) challenge methods in Penaeus vannamei. Aquaculture 2019. New Orleans, LA (ID: 26853)

Cruz Flores, R., Millabas, J., Kaneshamoorthy, S., & Dhar, A. K. (2019, Marzo). PATHOGEN DETECTION FROM DAVIDSON¿S FIXED PARAFFIN EMBEDDED SHRIMP TISSUE. Aquaculture 2019. New Orleans, LA (ID: 26854)

Cruz Flores, R., Mai, H. N., & Dhar, A. K. (2018). Multiplex SYBR Green and duplex TaqMan real-time PCR assays for the detection of Photorhabdus Insect-Related (Pir) toxin genes pirA and pirB. Molecular and Cellular Probes, 43, 20-28. doi: 10.1016/j.mcp.2018.12.004. (ID: 26835)

Cruz Flores, R., & Dhar, A. K. (2018, Octubre). MULTIPLEX SYBR GREEN REAL-TIME PCR ASSAY FOR THE DETECTION AND QUANTIFICATION OF PHOTORHABDUS INSECT-RELATED (PIR) TOXIN GENES PIRA AND PIRB. LACQUA 2018. Bogotá, Colombia (ID: 26851)

Cruz Flores, R., García Mendoza, M., & Cáceres Martínez, J. A. (2018, Mayo). Advances in the study of the phage hyperparasite, PCXc, and Candidatus Xenohaliotis californiensis in Haliotis spp. from Mexico. 10th International Abalone Symposium. Xiamen, China (ID: 23891)

García Mendoza, M. E., Cepeda Ochoa, M., Araneda, C., Bonett Calzada, B. G., Cruz Flores, R., Guerrero Rentería, Y., Cáceres Martínez, J. A., Beas Luna, R., & Lafarga de la Cruz, F. (2018, Mayo). Preliminary results on genetics and health status of black abalone Haliotis cracherodii in two locations of Baja California, México. 10th International Abalone Symposium. Xiamen, China (ID: 23737)

Cruz Flores, R., Cáceres Martínez, J. A., Juárez Moreno, K. O., & García Mendoza, M. E. (2018, Mayo). Effect of silver nanoparticles in the red abalone Haliotis rufescens and its parasitic load. 10th International Abalone Symposium. Xiamen, China (ID: 23890)

Cruz Flores, R., Cáceres Martínez, J. A., del Río Portilla, M. Á., Licea Navarro, A. F., González Sánchez, R. A., & Guerrero, A. (2018). Complete genome sequence of a phage hyperparasite of Candidatus Xenohaliotis californiensis (Rickettsiales) - a pathogen of Haliotis spp (Gasteropoda). Archives of Virology. doi: 10.1007/s00705-018-3703-3. (ID: 23052)

Cruz Flores, R., Muñoz Flores, M., & Cáceres Martínez, J. A. (2017, Junio). Hyperparasitism and abalone Withering Syndrome, their role in sudden mass mortalities of abalone in Baja California, México. 50th Western Society of Malacologists. Los Angeles, CA (ID: 22977)

Cruz Flores, R., Juárez Moreno, K. O., & Cáceres Martínez, J. A. (2017, Junio). Evaluation of silver nanoparticles on the prevalence and intensity of Candidatus Xenohaliotis californiensis in cultured red abalone Haliotis rufescens. 50th Western Society of Malacologists. Los Angeles, CA (ID: 22973)

Perez Bustamante, I. S., Cruz Flores, R., & Cáceres Martínez, J. A. (2017, Junio). Protozoans associated with siphon lesions of the clams Panopea generosa and Panopea globosa. 50th Western Society of Malacologists. Los Angeles, CA (ID: 22975)

Cruz Flores, R., Muñoz Flores, M., & Cáceres Martínez, J. A. (2017, Mayo). Hiperparasitismo y desarrollo del síndrome de deshidratación del abulón, su papel en las mortalidades masivas inexplicables. LIV Semana de Ciencias Marinas, XXV Congreso Nacional Estudiantil de la FCM, IV Congreso Nacional Estudiantil de Ciencias del Mar y Medio Ambiente. Ensenada, México (ID: 23513)

Cruz Flores, R., Cáceres Martínez, J. A., Muñoz Flores, M., Vásquez Yeomans, R., Hernández Rodríguez, M., del Río Portilla, M. Á., Rocha Olivares, A., & Castro Longoria, E. (2016). Hyperparasitism by the bacteriophage (Caudovirales) infecting Candidatus Xenohaliotis californiensis (Rickettsiales-like prokaryote) parasite of wild abalone Haliotis fulgens and Haliotis corrugata from the Peninsula of Baja California, Mexico. Journal of Invertebrate Pathology, 140, 58-67. doi: 10.1016/j.jip.2016.09.001. (ID: 20935)

Cáceres Martínez, J. A., Hernández Mercado, Y., Cruz Flores, R., Muñoz Flores, M., & Vasquez Yeomans, R. (2016). Identification of Burrowing Worms and Bacteria Associated with Shell Injuries on Red Abalone Cultured in Baja California, Mexico. World Aquaculture, 47(3), 55-58. (ID: 20947)

Cáceres Martínez, J. A., Cruz Flores, R., Muñoz Flores, M., Vasquez Yeomans, R., Hernández Rodríguez, M., del Río Portilla, M. Á., & Rocha Olivares, A. (2016, Junio). Symbionts and parasites of Abalone of commercial importance from the Peninsula of Baja California, Mexico. 49th Western Society of Malacologists and 82nd American Malacological Society Annual. Ensenada, México (ID: 20810)

Cáceres Martínez, J. A., & Cruz Flores, R. (2016, Junio). Diseases of Abalone around the World: A review. 49th Western Society of Malacologists and 82nd American Malacological Society Annual. Ensenada, México (ID: 20809)

Cáceres Martínez, J. A., Cruz Flores, R., & Vasquez Yeomans, R. (2016, Junio). Symbionts, parasites and diseases of the Generous Clam (Panopea generosa) from the Pacific coast of Baja California, Mexico. 49th Western Society of Malacologists and 82nd American Malacological Society Annual. Ensenada, México (ID: 20808)

Cruz Flores, R., Cáceres Martínez, J. A., & Vasquez Yeomans, R. (2016, Febrero). Optimization of the procedure to separate membrane bound vacuoles of Candidatus Xenohaliotis californiensis from host abalone tissue. Aquaculture 2016. Las Vegas, NV (ID: 20595)

Cruz Flores, R., Muñoz Flores, M., Cáceres Martínez, J. A., Vasquez Yeomans, R., del Río Portilla, M. Á., Hernández Rodríguez, M., & Rocha Olivares, A. (2016, Febrero). Candidatus Xenohaliotis californiensis and its hyperphage in blue and yellow abalone of the Peninsula of Baja California, Mexico. Aquaculture 2016. Las Vegas, NV (ID: 20594)

Cáceres Martínez, J. A., Hernández Mercado, Y., Vasquez Yeomans, R., & Cruz Flores, R. (2016, Febrero). Identification of borrowing worms and bacteria associated with Shell injuries on Red abalone Haliotis rufescens cultured in Baja California. Aquaculture 2016. Las Vegas, NV (ID: 20598)

Cruz Flores, R., & Cáceres Martínez, J. A. (2016). The hyperparasite of the rickettsiales-like prokaryote, Candidatus Xenohaliotis californiensis has morphological characteristics of a Siphoviridae (Caudovirales). Journal of Invertebrate Pathology, 133, 8-11. doi: 10.1016/j.jip.2015.11.006. (ID: 19481)

Cáceres Martínez, J. A., Vasquez Yeomans, R., & Cruz Flores, R. (2015). First description of symbionts, parasites, and diseases of the Pacific geoduck Panopea generosa from the Pacific coast of Baja California, Mexico. Journal of Shellfish Research, 34(3), 751-756. doi: 10.2983/035.034.0304. (ID: 19484)

Cáceres Martínez, J. A., Vasquez Yeomans, R., & Cruz Flores, R. (2015). A new pathology in the red abalone Haliotis rufescens (Mollusca: Gastropoda) cultured in Baja California, Mexico, associated with macro-crystal inclusions in gonadal tissue. Hidrobiológica, 25(2), 41-48. (ID: 19483)

Cruz Flores, R., Cáceres Martínez, J. A., & Vásquez Yeomans, R. (2015). A novel method for separation of Rickettsiales-like organism "Candidatus Xenohaliotis californiensis" from host abalone tissue. Journal of Microbiological Methods, 115, 79-82. doi: 10.1016/j.mimet.2015.05.021. (ID: 19142)

Cruz Flores, R., Muñoz Flores, M., Cáceres Martínez, J. A., Vasquez Yeomans, R., Hernández Rodríguez, M., Rocha Olivares, A., & del Río Portilla, M. Á. (2014, Junio). Distribution of the parasite candidatus Xenohaliotis californiensis in blue and yellow abalone in the main fishing area of the Península of Baja California, México. Mollusca 2014, El Encuentro de las Américas. Ciudad de México, México (ID: 17473)

Cuervo Ventura, J., Romero Rodríguez, Á., Cáceres Martínez, J. A., Vásquez Yeomans, R., & Cruz Flores, R. (2013, Junio). Parasitic load of the eastern oyster Crassostrea virginica in three coastal lagoons of Tabasco, Gulf of México and its imlications for production. 46th Annual Meeting Western Society of Malacologists. San Diego, CA (ID: 17265)

Cruz Flores, R., Cáceres Martínez, J. A., Vásquez Yeomans, R., & Guerrero Rentería, Y. (2013, Junio). Distribution, prevalence and intensity of Xenohaliotis californiensis parasite of abalone, Haliotis fulgens and Haliotis corrugata in the Peninsula of Baja California, México. 46th Annual Meeting Western Society of Malacologists. San Diego, CA (ID: 17262)

Departamento:	Acuicultura
División:	Oceanología
SNI:	I
Graduado en:

Título	Estudiante	Fecha
Evaluación de dos dietas comerciales en el desarrollo gonadal y la carga simbiótica en el abulón rojo (Haliotis rufescens)	Melany Alexandra Sánchez González	17-10-2025
Detección y caracterización molecular de Oomicetos que afectan al alga parda Macrocystis pyrifera con un enfoquedirigido a mejorar las prácticas acuícolas	Martin Romario Reyes Martínez	08-08-2025
Prototipo de una vacuna de inmersión utilizando células inactivadas de Streptococcus agalactiae y Pseudomonas sp. para tilapia (Oreochromis niloticus)	Jocelyne García Armenta	29-05-2024
Detección de agentes patógenos en el ambiente de cultivo del camarón blanco del Pacífico (Penaeus vannamei) a través de la secuenciación masiva de nueva generación	Mriya Michele Celeste López Galicia	30-04-2024
Estudios epizootiológicos y caracterización de las bacterias tipo-Rickettsiales que infectan al ostión Crassostrea corteziensis	Teresita del Carmen Guarneros Martínez	09-05-2023

Cruz Flores Roberto

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